LXVI SIGA Annual Congress

Logo 66 convegno annuale

LXVI SIGA Annual Congress
Climate-smart plants to feed the future

Bari, 5-8 September 2023

Programme

Session 1 – Omics to study and use genetic resources in plant breeding

Session 2 – Breeding for resilience: addressing climate change in plant genetics

Session 3 – Innovative methods and tools in plant genetics and breeding

Session 4 – Underground genetics: roots and their interactions

Session 5 – Exploring the plant epigenomes

Session 6 – Fruit and forest trees genomics, genetics and breeding

Session 7 – Updates and upgrades in genomics editing

Authors Index

Keywords

Organised by:

Dipartimento di Scienze del Suolo, della Pianta e degli Alimenti

Dipartimento di Scienze Agrarie, Alimenti, Risorse Naturali e Ingegneria



Under the patronage of:
Logo FISV

Logo AISSA


With the support of:
Logo Biogya
Logo Chemie
Logo CIB
Logo Confcooperative
Logo Edivite
Logo EITFood
Logo IGA


Logo ISI


Logo Levanchimica
Logo Lorusso
Logo Raguso
Logo Sequentia
Logo Sysmex
Logo Thermofisher
Logo United_Genetics

Programme

TUESDAY, SEPTEMBER 5th
13:00 – 14:30 Registration
14:30 – 14:50 Opening ceremony
Chairpersons: Filippone E., Ricciardi L., Lotti C.Welcome addresses by Institutional and Local Authorities
14:50 – 15:00 Communication from EIT-FOOD Projectmanager at UNIBA
De Ruggeri B.
EIT Food: Innovation for a healthy and sustainable food system
15:00 – 16:45 Session 1 – Omics to study and use genetic resources in plant breeding
Chairpersons: Ambrosone A., Mazzucotelli E.
15:00 – 15:30 Invited Lecture
Iorizzo M.
Omics approach to uncover the origin of high carotenoid orange carrots
15:30 – 15:45 Forestan C., Bozzoli M., Maccaferri M., Tuberosa R., Mazzucotelli E., Desiderio F., Faccioli P., Cattivelli L., Ens J., Sharpe A., Pozniak C., Chawla H., Walkowiak S., Pirona R., Ceriotti A., Morgante M., Masci S., Sestili F., Giuliano G., Gadaleta A., Pè M.E., Pecchioni N., Bassi F.M., Distelfeld A., Rusholme-Pilcher R., Hall A., Swarbreck D., Spannagl M., Navratilova P., Šimková H., Silvestri M., Zastrow-Hayes G., Llaca V., Fengler K., The Svevo Platinum Consortium, The Tetraploid Wheat Pangenome Consortium
Upgrading the Durum wheat Genomic Resources: from the Platinum-quality Svevo genome assembly and annotation to the tetraploid wheat pangenome
15:45 – 16:00 Miculan M., Zuccolo A., Fabbian L., Zhou Y., Rivera L.F., Copetti D., Talag J.D., McNally K., Henry A., Wing R.A.
Disentangling the genome wide contribute of structural variations to drought stress resistance in the model species Oryza sativa
16:00 – 16:15 Gabelli G., Palumbo F., Boni A.G., Ferrari G., Beretta M., Barcaccia G.
Deciphering the recombination spots scenario in a MAGIC population of cultivated and wild tomato
16:15 – 16:30 Tripodi P., Beretta M., Peltier D., Kalfas I., Vasilikiotis C., Laidet A., Briand G., Aichholz C., Zollinger T., van Treuren R., Scaglione D., Goritschnig S.
Development and application of single primer enrichment technology (SPET) SNP assay for population genomics analysis and candidate gene discovery in lettuce
16:30 – 16:45 Gaccione L., Toppino L., Sulli M., Tumino G., Alonso D., Aprea G., Tassone M.R., Boyaci H.F., Lin Y., Lanteri S., Prohens J., Portis E., Rotino G.L., Giuliano G., Barchi L.
Genome-wide association study for agronomically relevant traits and fruit quality-related metabolites in a worldwide eggplant core collection
16:45 – 17:15 Coffee Break and Poster Viewing
17:15 – 18:45 Session 1 – (cont.)
17:15 – 17:30 Americo S., Ferrari G., Desiderio F., Guerra D., Beretta M., Lo Piero A.R., Sicilia A., Morelli G., Cattivelli L., D’Orso F.
Unveiling the position and effects on salt stress resilience of wild S. pennellii genome in S. pennellii x S. lycopersicum introgression lines through integrated DNA and RNA sequencing approach
17:30 – 17:45 Tafuri A., Pirona R., Fricano A., Mazzucotelli E., Cagliani L.R., Gasser M., Giordano M., Zuccaro M., Ravaglia S., Consonni R., Thomas A., Gilardi F., Ceriotti A., Baldoni E.
Metabolite characterization of durum wheat grain for association studies: exploring the natural variation of free asparagine content
17:45 – 18:00 Delvento C., Arcieri F., Marcotrigiano A.R., Guerriero M., Fanelli V., Dellino M., Curci P.L., Bouwmeester H., Lotti C., Ricciardi L., Pavan S.
High-density linkage mapping and genetic dissection of resistance to broomrape (Orobanche crenata Forsk.) in pea (Pisum sativum L.)
18:00 – 18:15 Bono G.A., Giaume F., Vicentini G., Mineri L., Betagnon G., Fornara F., Brambilla V.
Molecular control of flowering at the rice shoot apex
18:15 – 18:30 Foresti C., Amato A., Fattorini C., D’Incà E., Vitulo N., Zenoni S.
NACs intra-family hierarchical regulatory network orchestrating grape berry ripening
18:30 – 18:45 General discussion
19:00 – 20:30 Welcome Cocktail
WEDNESDAY, SEPTEMBER 6th
09:00 – 10:45 Session 2 – Breeding for resilience: addressing climate change in plant genetics
Organized by Next Generation SIGA
Chairpersons: Broccanello C., Di Marsico M.
09:00 – 09:30 Invited Lecture
Dixon L.
Adapting cereal development to changing climates
09:30 – 09:45 Persello A., Rotasperti L., Torricella V., Ballabio F., Betti A., Tadini L., Camilloni C., Hansson M., Rossini L., Horner S.D., Salvi S., Pesaresi P.
Pale-green crops for a new sustainable agriculture
09:45 – 10:00 Bubici G., Batelli G., Cellini F., Costa A., De Palma M., Grillo S., Melillo M.T., Petrozza A., Prigigallo M.I., Ruocco M., Sportelli G., Stavolone L., Summerer S., Veronico P., Cillo F.
A phenomics approach to drought and pathogen responses in a tomato genotype collection
10:00 – 10:15 De Sario F., Liu C., Bozzoli M., Forestan C., Ratti C., Bruschi M., Novi J.B., Campana M., Sciara G., Ormanbekova D., Corneti S., Confortini A., Viviani A., Stefanelli S., Giulini A., Bardelli T., Novarina E., Gadaleta A., Mazzucotelli E., Desiderio F., Viola P., Invernizzi C., Oliveri F., Mastrangelo A.M., Marone D., Roncallo P., Bassi F., Perovic D., Cattivelli L., Tuberosa R., Maccaferri M.
The Global Durum Genomic Resource in use: a collaborative genomics initiative to leverage genetic resources for increasing and characterizing the breeding value of durum varieties
10:15 – 10:30 Colanero S., Martignago D., Loukili I., Sutti A., Landoni B., Cioffi S., Bosc A., Tonelli C., Galbiati M., Conti L.
Engineering water use in tomato by generating SlMyb60 mutants using a CRISPR-Cas9- based approach
10:30 – 10:45 General Discussion
10:45 – 11:15 Coffee Break and Poster Viewing
11:15 – 13:15 Session 3 – Innovative methods and tools in plant genetics and breeding
Chairpersons: Lotti C., Pavan S.
11:15 – 11:45 Invited Lecture
Bai Y.
Impaired plant susceptibility genes in resistance breeding: from concept to cultivars
11:45 – 12:00 Bettinelli P., Bianco L., Fontana P., Moser M., Pindo M., Nicolini D., Costantini L., Stefanini M., Hausmann L., Vezzulli S.
Black rot resistance of grapevine: from organ-specific QTL mapping to the sequencing of the donor towards candidate gene identification
12:00 – 12:15 Li R., Cui L., Martina M., Moglia A., Bracuto V., Meijer-Dekens F., Wolters A.A., Bai Y., Acquadro A.
Less is more: CRISPR/Cas9-based mutations in DND1 gene enhance tomato resistance to powdery mildew with low fitness costs
12:15 – 12:30 Caproni L., Altman T., Ferguson J., Heuermann M., Kromdijk J., Pè M.E., Dell’Acqua M.
Combining phenomics approaches from pot to plot to identify candidate genes for photosynthesis improvement in the multi parent MAGIC maize population
12:30 – 12:45 Bozzoli M., Bruschi M., Fanelli Carvalho H., Isidro y Sánchez J., Ruggeri M., Meriggi D., Manstretta V., Bartoccetti E., Sgrelli S., Meriggi P., Tuberosa R., Maccaferri M.
INNOVAR project: developing high-throughput phenotyping and genetic methods and technologies to improve accuracy in agriculture and in wheat varietal registration protocols
12:45 – 13:00 Michelotti V., Rossi R., Crosatti C., Mica E., Guerra D., Colombo M., Masiero S., Radchuk V., Cattivelli L., Battaglia R.
Sporophytic control of male fertility, the role of the SWEET4 gene in barley
13:00 – 13:15 General Discussion
13:15 – 13:30 EUCARPIA: current progressive future opportunity for plant breeding
Ercolano M.R.
13:30 – 14:30 Lunch Break
14:30 – 16:30 Session 4 – Underground genetics: roots and their interactions
In memory of Marina Tucci
Chairpersons: Beretta M., Salvi S.
14:30 – 15:00 Invited Lecture
Laplaze L.
Targeting root traits to improve tolerance to vegetative drought episodes in pearl millet (Pennisetum glaucum L.)
15:00 – 15:15 Puglisi D., Carletti G., Delbono S., Cattivelli L., Fricano A.
Shovelomics and clear pot analyses highlight extensive natural genetic variation for root system architecture in barley
15:15 – 15:30 Daddiego L., Bianco L., Alagna F., Lopez L., Panara F., Fantini E., Facella P.
Differential expression patterns of cryptochrome and circadian clock genes between roots and leaves in Medicago truncatula
15:30 – 15:45 Scintu D., Shtin M., Svolacchia N., Sabatini S., Dello Ioio R., Di Mambro R.
Exploring root programmed cell death as a mechanism for heat stress resilience
15:45 – 16:15 Invited Lecture
Pieterse C.M.J.
The root microbiome and plant immunity
16:15 – 16:30 General Discussion
16:30 – 17:00 SIGA Young Research Award 2023
Dedicated to Francesco D’Amato and Gian Tommaso Scarascia Mugnozza
Chairpersons: Filippone E., Rosellini D.
Rotasperti L.
The barley mutant happy under the sun 1 (hus1): An additional contribution to pale green crops
Iohannes S.D.
Data-driven, participatory characterization of farmer varieties discloses teff breeding potential under current and future climates
Award ceremony
17:00 – 17:45 Coffee Break and Poster Viewing
17:45 – 19:30 SIGA General Assembly
THURSDAY, SEPTEMBER 7th
09:00 – 10:15 Session 5 – Exploring the plant epigenomes
Chairpersons: Comino C., Varotto S.
09:00 – 09:30 Invited Lecture
Zilberman D.
Long-term epigenetic inheritance and phenotypic diversity in natural populations
09:30 – 09:45 Bevilacqua I., Moffa L., Varotto S., Chitarra W., Nerva L.
Harnessing genome editing to elucidate the role of histone variant H2A.Z in grapevine
09:45 – 10:00 Liva M., Magris G., Di Gaspero G., Schwope R., Catacchio C.R., Daponte A., Ventura M., Morgante M.
Analysis of genetic and epigenetic structure and variability of grapevine centromeres through the use of long read sequencing and T2T assemblies
10:00 – 10:15 General Discussion
10:15 – 11:30 Coffee Break and Poster Viewing
11:30 – 12:30 Session 6 – Fruit and forest trees genomics, genetics and breeding
Chairpersons: Giannino D., Montemurro C.
11:30 – 12:00 Invited Lecture
Gonzalez Martinez S.
Population vulnerability of a keystone Mediterranean tree under future climate – an ecological genomics approach
12:00 – 12:15 Garosi C., Vettori C., Bajc M., Kraigher H., Westergren M., Dovč N., Damjanić R., Sever K., Breznikar A., Gregoric A., Lanšćak M., Ivankovic M., Bogunović S., Paffetti D.
Genome-wide SNP association analysis reveals genomic signature of local adaptation in European beech (Fagus sylvatica L.)
12:15 – 12:30 Alicandri E., Sebastiani B., Paolacci A.R., Sorgonà A., Manti F., Bosignore C.P., Badiani M., Ciaffi M.
Terpenoids and the expression of terpene synthase genes are coherently and selectively modulated in Calabrian pine (Pinus nigra subs. laricio) in response to pine processionary moth (Thaumetopoea pityocampa) infestation
13:00 – 14:30 Lunch Break
14:30 – 17:15 Session 6 – (cont.)
14:30 – 15:00 Invited Lecture
Decroocq V.
Genetic diversity and use of stone fruit tree wild relatives for a more sustainable fruit production
15:00 – 15:15 Cominelli E., Beritognolo I., Cardoni S., Forti C., Cherubini M., Leonardi L., Leone P.A., Sparvoli F., Biffani S., Stella A., Toschi I., Cesari V., Chiozzotto R., Cirilli M., Pozzi C., Mattioni C.
Chestnut cultivation development in Lombardy: leveraging native genetic resources in two pilot areas
15:15 – 15:30 Costa F., Busatto N., Sayantan P., Vittani L., Populin F., Khomenko I., Biasioli F., Vrhovsek U., Aharoni A., Zanella A.
System genetics approach disclosed the genetic architecture of the chilling injury disorder superficial scald in apple
15:30 – 15:45 Simoni S., Castellacci M., Usai G., Giordani T., Natali L., Cavallini A., Besnard G., Mascagni F.
Genomic dynamics of olive trees in the Mediterranean basin: insights from the repetitive component evolution
15:45 – 16:00 Bonghi C., Canton M., Joseph J., Marconi G., Forestan C., Varotto S.
The bud peach dormancy dilemma
16:00 – 16:15 da Silva Linge C., Baccichet I., Chiozzotto R., Gasic K., Fu W., Byrne D., Rawandoozi Z., Worthington M., Bassi D., Cirilli M., Hardner C., Rossini L.
Unlocking genetic diversity for peach fruit acidity through global GWAs and genomic prediction-based selection
16:15 – 16:30 Michelotti V., Gentile A., Scortichini M., Lucioli S., Caboni E., Tacconi G.
Applyication of a CRISPR/CAS9 vector in A. chinensis var. chinensis to induce Pseudomonas syringae pv. actinidiae resistance/tolerance
16:30 – 16:45 Sicilia A., Villano C., Di Serio E., Aversano R., Ferlito F., Nicolosi E., Lo Piero Angela R.
Transcriptome analysis reveals plasticity of gene expression in wine grape cultivars grown at different latitudes in southern Italy
16:45 – 17:00 Bolognesi G., Crespan M., Broccanello C., Delfino P., Mora R., Marini M., Gardiman M., Giust M., Tomasi D., Bellin D.
Genome wide association analysis of phenology related traits in Vitis vinifera L.
17:00 – 17:15 General Discussion
17:15 – 17:45 Coffee Break and Poster Viewing
17:45 – 19:45 Parallel Poster Sessions
20:30 Social Event (Sala Zonno, Molo S. Nicola 3, Bari)
FRIDAY, SEPTEMBER 8th
09:30 – 12:15 Session 7 – Updates and upgrades in genome editing
Chairpersons: Lanubile A., Nigro D.
09:30 – 10:00 Invited Lecture
Cereseto A.
Expanding the genome editing toolbox by unlocking RNA guided nucleases using massive metagenomic data
10:00 – 10:15 Vicentini G., Bertagnon G., Giaume F., Fornara F., Brambilla V.
Controls of stem elongation by the flowering pathway in rice
10:15 – 10:30 Vaccino P., Sansoni F., Volante A., Zampieri E., Salvi S., Camerlengo F., Pierbattista S., Valè G., Crosatti C., Toppino L., Bono G.A., Fornara F., Pecchioni N.
A new rice plant ideotype through genome editing: the SUSRICE project
10:30 – 10:45 Maioli A., De Marchi F., Valentino D., Gianoglio S., Patono D., Miloro F., Bai Y., Comino C., Lanteri S., Lovisolo C., Acquadro A., Moglia A.
New insights on the role of SlDMR6-1 in drought avoidance in tomato
10:45 – 11:00 Nicolia A., D’Agostino N., Tamburino R., Festa G., Sannino L., Aufiero G., Paparo R., Arimura S., Scotti N., Cardi T.
Molecular and phenotypic characterization of potato plants edited in the mitochondrial genome by mitoTALEN and mitoTALECD approaches
11:00 – 11:15 Salvagnin U., Giacomelli L., Scintilla S., Rouppe van der Voort J., Zeilmaker T., Moser C.
Reduced susceptibility to downy mildew of DMR6 gene-edited grapevine plants and development of DNA-free edited mutants
11:15 – 11:30 Moffa L., Bevilacqua I., Pagliarani C., Gambino G., Perrone I., Velasco R., Lovisolo C., Nerva L., Chitarra W.
Improving grape resilience to drought exploiting the CRISPR/Cas technology: functional characterization of the target gene through Spray Induced Gene Silencing (SIGS)
11:30 – 12:00 Invited Lecture
Granell A.
Genome editing for better, healthier tomatoes
12:00 – 12:15 General Discussion
12:15 – 12:30 Closing Ceremony
Chairpersons: Filippone E., Salvi S.

Keywords index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 5
A
ABA7.08
ABA/drought6.25
abiotic stress2.03, 2.07, 2.42, 6.03
abiotic stress response1.30, 2.46
abiotic stresses2.49
abiotic tolerance4.13
abiotic/biotic stress6.26
abscisic acid2.05
abscisic acid-stress-ripening2.13
accessions2.14
adaptation2.01, 6.02, 6.13
agri-photovoltaic2.02
Agrobacterium-mediated transformation6.24
agrobiodiversity1.22
agrofood systems1.21
agroforestry4.23
alfalfa3.11
Algeria2.31
alien species1.27
allele mining6.19
allele variation1.34
allergens1.71
almond6.19, 6.20
anther6.27, 7.29
Anthesis1.34
anthesis control1.37
anthocyanins1.59, 1.61, 1.62, 1.66, 2.41
antifungal compounds2.39
antinutritional molecules1.67
antioxidant compounds4.10
AP2/ERF6.10
apple1.73, 6.06
apple scab6.15
Apulia6.32
Arabidopsis1.34
Arabidopsis thaliana5.05
ascorbic acid7.25
ASR2.13
AT4G088501.36
autopolyploidy2.40
B
B-glucan content1.54
backcross inbred lines1.45
bacterial community4.23
barley1.41, 2.02, 2.19, 2.20, 3.01, 3.20, 4.02
barley cultivars4.18
barley mutants2.21
base editing7.06
bean2.08
belowground traits4.02
beneficial fungi4.09
berry ripening1.11
berry texture6.28
bioactive compounds1.55, 1.66
bioactive molecules1.70
biochar4.10
bioclimatic evaluation2.31
biodiversity1.19, 2.14, 2.31, 2.36, 4.24, 6.33
biodiversity conservation2.34
biofortification7.21, 7.22
bioinformatics4.22, 6.14
biostimulant4.16
biostimulants4.08
biotic stress2.03, 2.42, 6.24
biotic stress resistance7.30
black scurf2.39
Blumeria graminis1.45
Brachypodium1.56
Brassica napus3.08
Brassica oleracea1.23
bread wheat2.11, 2.12, 3.21
breeding1.09, 2.22, 2.32, 3.07, 6.19, 7.29
breeding for resilience2.10
breeding strategy3.11
broccoli-raab1.37
broomrape1.09
BSA-seq2.48
Budbreak5.07
C
calli7.27
callus culture1.64
Camelina sativa2.32
candidate genes1.05, 1.56
candidate genes association analysis6.03
cannabinoids1.63, 1.68
Cannabis sativa L.1.60
CAPS markers3.14
Capsicum annum L.1.52
Capsicum annuum1.65, 3.14
carboxylesterase2.43
carotenoid genetics1.01
carpel development7.09
cauliflower3.07
CBCA1.68
cell suspension culture3.21
cell wall1.16, 6.28
cellular agriculture1.70
cellulose1.16
centromeres5.03
cereal3.23
chemical characterization1.53
chemical treatment3.25
chicory1.36
ChIP-Seq1.15, 5.09, 5.10
Chromatin Immunoprecipitation3.10
chromosome engineering3.15
Cichorium endivia1.35
Cime di Rapa1.34
Circadian clock4.03
cis-regulatory elements2.27
cisgenesis7.02, 7.30
cisgenesis and genome editing7.31
Citrus5.06
Citrus rootstock2.30
citrus varieties7.31
Cleaved Amplified Polymorphic Sequences (CAPS)3.13
climate adaptation6.03
climate change2.06, 2.18, 2.35, 5.07, 6.18
climate resilience2.23
climate services2.24
cold5.06
combined assembly3.31
commmon bean (Phaseolues vulgaris L.)1.51
common bean1.21
comparative transcriptomics1.50
conservation6.33
cosmetics1.70
cotton2.51
cover crop2.32
cowpea2.23
CPVO2.08
CRE6.23
CRE-LOX system3.18
CRISPR7.02, 7.09
CRISPR-Cas91.61, 7.10
CRISPR-dCas93.10
CRISPR/Cas5.02
CRISPR/Cas92.22, 3.03, 6.10, 6.25, 6.28, 7.16, 7.17, 7.20, 7.21, 7.22, 7.23, 7.24, 7.25
crocins7.15
crop genetics2.24
crop yield2.21
crossing over3.15
Crossing over1.04
cryptochromes4.03
Cucumis melo L.3.27
culm morphology2.20
cultivar evaluation2.06
cutin6.15
Cynara cardunculus L. var. scolymus2.38
D
D272.45
D27-like genes2.45
DAP-seq1.11, 1.15, 6.27
DAPC1.17
DAPseq6.23
ddRAD1.20
ddRAD seq1.27
ddRAD-seq1.19
ddRADseq1.25
defatted seed meals2.11
defoliation6.04
Denaturing gradient gel electrophoresis3.27
differential allelic expression6.21
digital canopy model3.06
digitalization3.17
Disease Evaluation1.42
disease resistance1.45
Distinctiness-Uniformity-Stability (DUS)2.04
divergent loci1.20
DMR67.23
DNA fingerprinting6.34
DNA methylation5.03, 5.05, 5.07
DNA-free genome editing7.27, 7.28
DND1 gene3.03
domestication2.51
dormancy6.18
dosage7.12
doubled haploids3.07
downy mildew7.07
DOWNY MILDEW RESISTANCE 67.05
drought1.30, 2.13, 2.37, 2.40, 3.23, 4.13, 4.20, 5.08, 5.09, 7.08
drought stress1.03, 1.47, 2.17, 2.30, 2.43, 2.45, 2.47, 4.16, 5.10, 7.05
drought tolerance2.05, 2.49
duckweed3.26
durum wheat1.02, 1.08, 1.17, 1.29, 1.47, 1.54, 1.58, 2.14, 2.15, 2.16, 2.17, 3.17, 3.18, 3.20, 7.11
durum wheat breeding line1.55
durum wheat landraces1.18
E
ecophysiological measurements7.05
ecotypes1.24
editing3.08
eggplant1.61, 7.24
electromagnetic waves5.05
elicitation1.63, 1.65
embriogenic calli7.26
embryogenic calli6.24, 7.29
enviroment adaptation2.10
enzymatic-browning1.72
EPFL96.25
epicuticular waxes2.17
epigenetic5.06
epigenetic memory5.10
epigenetics5.05
epigenome5.02, 5.04
eQTL1.13
essential oils1.37
EST-SSR1.25
ethylene6.16
ethylene responsive factors7.20
evolution3.12
F
Fagus sylvatica6.03
Fagus sylvatica L.6.14
fertilization strategies2.12
fig tree6.21
fingerprinting1.22
firmness7.18
fitness costs3.03
flooding2.40
florigens7.09
flower6.27
flower development3.01
flowering1.10, 1.35, 7.10
flowering time1.33, 3.16
food security4.01
food traceability3.13
forage quality2.06
forest genetic resources6.13
forest trees6.01
forward genetic2.02
forward reverse genetic approaches3.25
free asparagine1.08
fruit and plant morphological traits6.05
fruit antioxidants7.20
fruit morphology3.13
fruit nutritional analyses6.05
fruit quality5.04, 6.06
fruit softening7.18
fruit traits and diseases7.31
FTIR2.52
functional food1.62
functional genomics1.32, 1.50, 3.20
Furovirus2.15
Fusarium1.44
Fusarium foot rot2.14
Fusarium verticilliodes2.36
G
GA signalling7.10
gas exchange7.08
Gbs1.53
GBS1.20
Gene Coexpression Networks3.16
gene duplication7.12
gene editing2.43, 7.07
gene expression1.34, 1.64, 1.72, 2.26, 3.22
gene network2.44
gene regulation1.15, 3.10
gene-expression-profile1.48
genetic analyses2.08
genetic and phenotypic characterizations6.17
genetic characterization2.35
genetic diversity1.18, 2.10, 2.38, 3.16, 6.05, 6.13, 6.22
genetic evaluation6.33
genetic fingerprinting1.27
genetic maps6.16
genetic markers1.35, 6.22
genetic offset6.01
genetic resources1.25, 1.43, 1.57, 2.04, 2.37
genetic transformatio3.26
genetic variability1.24, 1.53, 2.34, 3.09, 6.20
genome assembly1.02
genome editing1.49, 2.17, 7.02, 7.04, 7.11, 7.17, 7.18, 7.20, 7.21, 7.22, 7.23, 7.24, 7.25, 7.26, 7.29
genome evolution6.07
Genome Wide Association Studies6.09
Genome Wide Association Studies (GWAS)1.51
Genome Wide Association Study1.03
genome-wide1.16
Genome-Wide Association Studies4.02
Genome-Wide Association Study1.08, 4.12
genomic diversity1.05
genomic library preparation1.12
genomic prediction4.02
genomic selection3.11
genomics1.07, 2.23, 3.05, 6.01, 6.02
genotype diversity1.67
genotype x environment2.28
genotypes2.09
genotyping1.26, 2.48
genotyping arrays3.05
Genotyping by Sequencing3.28
Genotyping-by-Sequencing3.11
Genotyping-by-sequencing (GBS)1.23
germplasm bank2.35
germplasm resources4.14
Global genomic prediction6.09
Glutamate 1-semialdehyde aminotransferase7.13
Glutathione S-transferases2.47
glycaemic index1.55
glycaemic load1.55
Goldenbraid7.16
Gossypium2.51
GPAT66.15
grain colors1.59
Grain number increase1.39
Grain protein content1.58
grain quality1.56, 1.57
grain yield1.32, 3.19
Grain yield potential1.39
grapevine1.11, 1.15, 2.25, 2.26, 3.10, 4.21, 5.03, 6.24, 6.25, 6.26, 7.07, 7.08
grapevine drought stress2.29
grapevine rootstocks2.29
gravitropism4.19
GRF gene family3.20
GST2.49
Guignardia bidwellii3.02
GWAS1.05, 1.06, 1.40, 1.42, 1.43, 2.04, 2.10, 2.15, 2.18, 2.20, 3.05, 4.18, 6.12, 6.22
GxE interaction6.11
H
haplotype4.14
haplotype blocks1.28
haplotypes3.05
hazelnut (Corylus avellana L.)6.22
health-promoting effects1.59
healthy diet1.69
heat and water-deficit2.16
Heat Stress2.37
Heat Stress (HS)4.04
Helianthus annuus L.5.09
hemicellulose1.16
hemp1.63, 1.68
hereditability5.04
heritability1.40
heterozygosity6.21
Hierarchical intra-family network1.11
high intensity light7.19
high pigment tomato mutant7.19
high resolution melting1.26
high temperature2.50
high temperatures2.44
high throughput phenotyping3.04
high throughput sequencing1.12
high throughput SNP genotyping3.17
high-throughput genotyping1.05
high-throughput phenotyping4.09
histone modifications5.09, 5.10, 6.08
histone variant5.02
holobiont4.08
hologenome4.24
homologous recombination7.13
Hordeum vulgare1.42, 4.17
hormones6.08
hormones signalling2.26
HPLC-MS/MS1.60
HTP3.06
hus12.19
HvPDIL5-1 gene7.11
hydroponic cultivation1.51
I
improving photosynthesis2.19
in vitro culture1.66
in vitro digestibility1.67
in vitro propagation1.22
InDel2.44
inflorescence architecture1.32
Infra-Red Gas Analyser2.29
INNOVAR2.04
integrated omics4.08
Intelligent Collection1.21
interaction6.29
internode elongation1.10
interspecific hybrids3.31
Introgression Lines1.07
inversion3.15
Ion Torrent6.14
Iron oxide magnetic nanoparticles3.30
isolated microspore culture3.07
ITS3.27
J
juvenile stage1.68
K
K-seq protocol1.22
KASP2.18, 6.34
Keracyanin1.60
kernel development3.01
kernel taste6.19
kiwifruit6.10
L
laccase2.52
landrace1.19, 2.33
landraces1.25, 2.34
landscape genomics2.33, 6.13
late/post-ripening6.26
legumes2.09
lentil2.09
lettuce1.05, 4.10, 7.25
light4.03
linkage map2.25
local biodiversity6.17
local varieties1.23, 1.52
lodging2.20
long reads5.03
long-read sequencing1.03
low oxygen1.73
Lycopersicon esculentum1.49
lysin motif receptor-like kinase6.29
M
MAGIC3.24
MAGIC population1.04, 1.14, 3.04
maize1.33, 1.56, 2.33, 2.37
maize germplasm2.36, 4.20
maize landraces1.53
Maize traditional varieties2.35
male fertility7.06
male sterility3.29, 7.17
Malus7.30
Malus domestica1.72
Manihot esculenta1.48
mapping1.09
Marker-Assisted Breeding3.02
Marker-Assisted Selection1.39, 2.22, 3.14, 6.19, 6.30
marker-free7.31
MAS7.29
MATE1.60
MCSeEd5.06
MDIS1 INTERACTING RECEPTOR LIKE KINASE 21.36
MdPPO1.72
Medicago sativa2.07, 3.11, 7.13
Medicago truncatula4.03
Mediterranean Basin1.69, 6.33
medium7.14
meristem manipulation3.26
metabarcoding4.23
metabolic engineering1.65
metabolomics1.08, 1.69
metagenomics4.21
methyl-jasmonate1.64
methylome6.08
microbial breeding4.24
microbiome2.36
microbiomes4.09
microplastics2.52
micropropagation7.14
microsatellite markers6.20
microsatellite transferability6.17
microvine7.26
mineral nutrition2.12
miPEPs5.08
miRNAs2.28
MitoTALECD7.06
MitoTALEN7.06
molecular breeding3.28, 6.06
molecular markers2.32, 2.38
mono- and di-terpene synthase genes6.04
mono- and di-terpenoids6.04
morphological characterization2.35
morphological descriptors1.17, 1.21
morphological traits2.38
mountain environment2.08
mozambique2.24
multi-locus GWAS1.28
multiomics4.22
multiple stress1.49
multivariate data analysis1.52
mutants4.17
MYB108A6.27
MYB902.41
mycorrhizal root colonization4.10
N
NAC1.15
NAC transcription factors1.11
NAC616.26
nanopriming3.30
Near Infrared Spectroscopy2.06
New breeding technology7.30
New Plant Breeding Techniques (NPBTs)7.15
NGS6.27
NGS (next generation sequencing)1.22
NGS analysis6.07
Nicotiana benthamiana7.15
Nicotiana tabacum2.47
Nitrate Uptake3.22
nitrogen absorption7.04
Nitrogen Use Efficiency (NUE)3.22
NMR1.52
Non Photochemical Quencing (NPQ)2.21
novel food1.71
NPBTs7.02
nutraceuticals1.52
nutrient accumulation2.12
nutritional values2.38
O
oilseed crop2.32
Olea europaea1.64
Olea evolution6.07
oleaster2.31, 6.33
olive6.32
omic analysis1.35
omics1.37
omics approach1.46
omics data integration1.50
orange carrot1.01
ornamental plants3.28
Orobanchaceae4.07
Oryza sativa1.03, 7.04
Oxford Nanopore Techonology sequencing1.14
P
P-spline3.06
pale mutants2.19
pale-green2.02
PAMPs6.29
Pan-genome1.14
pangenome1.02
panicle development1.10
paralog compensation7.12
parasitic weeds2.45
participatory methods2.24
pasta supply chain3.17
Pea1.09
peach6.18
pear6.16
Pectate Lyase6.28
PEG2.30
pepper3.24
PGPM4.10, 4.16
PGPR4.06
PGRFA2.08
phased genome6.21
phasiRNAs2.28
Phelipanche ramosa4.07
phenological traits2.09
phenology6.12
phenomics2.03, 3.05
phenotype6.22
phenotypic characterization7.28
phenotypic plasticity2.51
phenotypic prediction6.01
phenotyping1.26, 2.25, 2.50, 3.23
photoperiod2.01, 6.08
photoprotection2.21
photosynthesis1.41, 2.02, 2.21, 3.04, 7.15
Photosynthesis-related traits1.14
phycoremediation2.52
Phyllosticta ampelicida3.02
phyllotaxis3.08
phylogenesis and evolution3.22
Phylogenetic analysis6.29
phylogeny3.29
phytic acid2.34
phytohormone4.04
phytohormones1.30
Phytophthora capsici3.14
pigmented maize1.66
pigmented mandarin-like hybrids3.31
Pinus nigra subsp. laricio (Poiret) Maire6.04
plant2.09
plant breeding1.41
plant cell cultures1.70
plant development1.30
plant genetic resources1.40, 6.34
plant genomics6.14
plant genotyping1.12
plant growth regulators7.14
plant growth-promoting rhizobacteria2.42
plant metabolism3.21
plant metabolites4.11
plant phenotyping2.03, 2.29
plant protection2.39
plant regeneration7.27
plant variety protection1.28
plant-microbe interactions2.42
plant-microbiome interaction4.22
ploidy analysis3.28
pollen development2.41
pollen‒stigma recognition1.36
polygalacturonase 2a (PG2a)7.16
polymorphism1.19
polyphenols1.46, 1.65, 1.72
polyploid1.24
polyploidy2.07, 2.51
population analysis2.33
population genetics3.12, 6.01
population genomics1.01
population studies1.12, 1.13
postharvest1.73, 6.06
postzygotic barrier1.31
potato1.46
potato chondriome7.06
powdery mildew3.03
powdery mildew candidate genes1.45
PREMATURE INTERNODE ELONGATION 1 (PINE1)7.03
Programmed Cell Death (PCD)4.04
protein content1.67
protoplast7.07, 7.27, 7.28
protoplasts3.10, 7.26
Prunus6.02
Prunus persica6.09
Prunus species6.17
Pseudomonas syringae pv. actinidiae6.10
purple durum wheat1.59
PVDC2.52
Q
QTL1.33, 1.40, 1.44, 6.16
QTL mapping1.58, 3.04, 3.19
QTLs2.25
quality1.29
Quantitative Trait Nucleotide1.28
R
rDNA3.27
ready-to-eat3.31
recombination1.04
redundancy7.12
regeneration7.14, 7.31
regulation of gene expression1.30
remote sensing1.26
resequencing1.06, 3.24
resiliance6.32
resilience2.33, 2.37
resilience traits4.14
resistance1.09, 1.44, 2.14, 2.15, 6.30
resistance genes3.12
resistant source2.11
resistant starch1.55
responsive backup circuits7.12
RGA4.19
rhizosphere microbiome4.22
rice1.10, 1.32, 1.56, 2.23, 7.10
rice blast2.22
rice flowering7.03
rice genetics7.09
ripening2.26
RNA sequencing1.13
RNA-seq1.47, 2.30, 3.30, 5.07, 6.31
RNAseq1.61, 6.11
RNP complex7.17
Rocket salad1.27
Rogosija1.18
root4.04, 4.12, 4.19, 7.04
root anatomy4.01
root and epicotyl development4.11
root architecture4.01, 4.01, 4.13, 4.19
root system architecture4.02, 4.14, 4.15
root system architecture RSA4.20
root system traits4.18
root transcriptomic4.22
roots1.66
RT-qPCR1.68
rucola3.25
rust diseases2.11
S
Saccharum spontaneum1.24
saffron hydroponics1.69
salinity2.13, 2.40, 4.13
salinity stress2.07
salt stress1.07, 2.47, 4.06
salt stress mitigation2.46
salt stress tolerance1.51
salt tolerance2.06
San Marzano landrace7.19
SBCMV2.15
SCOT markers1.27
seasonal-transition1.48
secondary metabolites1.64
seed development1.31
seed-nanoparticle interactions3.30
seedlessness6.30
seedling2.50
selection1.01
selection criteria4.20
selective sweeps1.06
self-incompatibility1.36, 3.29
sexual polyploidization2.07
shelf-life7.18
shoort and long read sequencing1.02
Sicilian landraces1.29
Single Nucleotide Polymorphism (SNP)3.13
Single Nucleotide Polymorphism (SNPs)6.03
Single Nucleotide Polymorphisms6.12
Single Nucleotide Polymorphisms (SNPs)6.14
SiO2 nanoparticles2.46
site-directed mutagenesis7.13
Small RNA-seq2.28
smallholders2.24
SNP1.25, 1.26, 1.53, 2.18, 2.44, 6.34
SNP array1.18
SNP genotyping1.29, 3.02
SNP markers1.20
SNPs1.23, 3.27
soil compaction4.18
soil health4.15
Soil-borne pathogens3.14
Soil-borne viruses7.11
Solanaceae7.17, 7.21
Solanum lycopersicum1.04, 2.03, 2.05, 2.42, 2.47, 2.49, 3.16, 4.09, 5.10, 7.20
Solanum lycopersicum L.3.13, 7.05
Solanum melongena1.06, 7.23
Solanum pennellii4.07
Solanum tuberosum2.39
somaclone regeneration3.09
somatic embryogenesis3.09, 7.28
source-sink3.01
spike development3.19
Spike fertility1.38
spike-related traits3.19
sRNAs5.08
SSR2.31
SSR genotyping3.28
SSR markers1.24
starch mutants3.21
stem elongation7.03, 7.10
stem gibberellin sensitivity7.03
stem rust1.43
stigma position2.48
stilbenoid metabolism6.26
Stomata formation6.25
stomatal closure2.05
stone fruit tree6.02
straw biomass2.19
straw quality1.41
stress combination2.16
stress memory5.09
stress resilience1.50, 5.02
stress resistance2.36
stress tolerance2.16, 7.23
stress-response1.48
Strigolactones2.43, 2.45, 4.07, 4.17
Structural Variants1.14
structural variation1.03
style exertion2.48
Sun Black genotype1.62
superficial scald1.73, 6.16
susceptibility genes7.05
sustainability4.11, 4.18, 7.04
sustainable agriculture2.34, 4.12, 4.15, 4.16
sustainable biotechnology3.09
Sustainable Forest Management6.13
sweet chestnut6.05
SWEET genes3.01
system genetics6.06
T
T. molitor1.71
T2T assembly5.03
Tarocco orange3.31
TEA2.22, 7.14
temperature2.01
terpenoids1.65
Tetraploid Wheat collection1.54
TFBS6.23
thaumatin-like proteins (TLPs)7.16
Thaumetopoea pityocampa (Denis & Schiffermüller 1775)6.04
thermotolerance2.25
tiller angle1.10
tilling4.19
TILLING2.20
titratable acidity6.09
tomato1.07, 2.43, 2.46, 2.48, 2.50, 3.12, 3.15, 4.06, 4.08, 5.04, 7.02, 7.22
tomato allergens7.16
tomato landraces7.18
tomato peels1.62
tomato resistance3.03
tomato waste1.62
tomato wild relatives2.49
Ton13.18
traceability1.29, 3.17
trade-off4.24
traditional variety7.19
transcription factors1.59, 1.60, 2.26, 3.16
transcriptome1.02, 1.49, 2.30, 6.08, 6.11, 6.31
transcriptome analysis1.63
transcriptomics1.07, 1.73, 2.46, 4.21, 6.18
translational science1.41
transpiration efficiency4.01
transposable elements1.33
triploid block1.31
Triticum aestivum1.40, 1.42
Triticum dicoccum1.38
Triticum durum1.42
Triticum turgidum1.38, 4.14
Triticum turgidum ssp. dicoccoides1.45
Triticum turgidum subsp. durum3.22
Tropomyosin1.71
TRV7.24
U
UAV3.06
UPOV protocol1.28
UPOV traits1.17
useful alleles1.57
UV stress2.40
V
Venturia inaequalis6.15
VIGE7.24
Vitamin D7.21
Vitis spp3.02
Vitis vinifera2.27, 2.28, 5.07, 6.12, 6.28, 6.29, 7.28
Vitis vinifera clones1.20
Vitis vinifera L.6.11, 7.27
VviAGL117.26
W
water deprivation1.46
water scarcity4.09
water stress2.27
water use efficiency4.11
WCGNA6.11
wheat1.43, 1.44, 2.01, 2.13, 3.06, 4.12, 4.15
wheat improvement1.39
whole grain content1.08
wild emmer1.43
wild emmer wheat2.10
wild introgressions2.16
wild relatives3.12
wild species2.44
Wolffia globosa3.26
X
Xylella fastidiosa6.31
xyloglucan endotransglucosylase/hydrolase1.16
Y
YFP6.15
yield3.08, 3.18, 3.20
yield-related traits1.58
Z
Zea mays L.1.19
zeaxanthin7.15
5
5-azacytidine5.06