LXIV SIGA Annual Congress

LXIV SIGA Annual Congress
“Plant genetic innovation for food security in a climate change scenario”

14-16 September 2021

Programme

Session 1 – Unlocking the potential of genetic resources

Session 2 – Filling the gap between potential and actual yields: Novel routes to boost crop yield

Session 3 – The bright and dark side of seeds: nutritional, antinutritional and functional properties

Session 4 – NGS: Next Generation SIGA

Session 5 – Abiotic stresses and resource use efficiency in a changing climate

Session 6 – Plants as biofactories

Session 7 – Plant Genetics and Breeding

Authors Index

Keywords

Programme

TUESDAY, SEPTEMBER 14th
09:00 – 09:30 Opening ceremony

Welcome addresses
Chairperson: Pe’ M.E.
09:30 – 11:00 Session 1 – Unlocking the potential of genetic resources
Chairpersons: Cattivelli L., Marconi G.
09:30 – 10:00 Invited Lecture
McNally K.
Sequencing of diverse rice genomes drives breeding innovation
10:00 – 10:15 Tripodi P., Rabanus-Wallace M. T., Barchi L., Kale S., Esposito S., Acquadro A., Schafleitner R., van Zonneveld M., Prohens J., José Diez M., Börner A., Salinier J., Caromel B., Bovy A., Boyaci F., Pasev G., Brandt R., Himmelbach A., Portis E., Finkers R., Lanteri S., Paran I., Lefebvre V., Giuliano G., Stein N.
Global range expansion history of pepper (Capsicum spp.) revealed by over 10,000 genebank accessions
10:15 – 10:30 Magris G., Jurman I., Fornasiero A., Paparelli E., Schwope R., Marroni F., Di Gaspero G., Morgante M.
The genomes of 204 domesticated and wild Vitis vinifera accessions reveal the history and the genetic ancestry of European wine grapes
10:30 – 10:45 Maccaferri M., Sciara G., Bozzoli M., Novi J., Campana M., Bruschi M., Forestan C., Ratti C., Prodi A., Invernizzi C., Viola P., Oliveri F., Randazzo B., Goundemand E., Devaux P., Mazzucotelli E., Mastrangelo A., Desiderio F., Bansal U., Bariana H., Ammar K., Cattivelli L., Bassi F., Tuberosa R.
Establishment of a global tetraploid wheat collection to facilitate the dissection of the native variation present in the A and B wheat genomes
10:45 – 11:00 Barchi L., Rabanus-Wallace M. T., Prohens J., Toppino L., Padmarasu S., Portis E., Rotino G.L., Stein N., Lanteri S., Giuliano G.
Genomic insights into the domestication and selection of key agronomic traits in eggplant following improved genome assembly and pan-genome analysis
11:00 – 12:10 Break and poster vision
12:10 – 13:00 Session 1 – (cont.)
12:10 – 12:25 Frugis G., Testone G., Di Vittori V., Paolo D., Liberatore C., Galbiati M., Locatelli F., Cominelli E., Confalonieri M., Rossato M., Delledonne M., Cortinovis G., Bellucci E., Bitocchi E., Rodriguez M., Attene G., Aragao F., Papa R., Sparvoli F.
TILLING-by-sequencing and genome editing for the functional validation of candidate domestication genes in common bean (Phaseolus vulgaris L.)
12:25 – 12:40 Pavan S., Vergine M., Nicolì F., Sabella E., Aprile A., Negro C., Fanelli V., Savoia M.A., Montilon V., Susca L., Delvento C., Lotti C., Nigro F., Montemurro C., Ricciardi L., De Bellis L., Luvisi A.
Screening of olive biodiversity defines genotypes potentially resistant to Xylella fastidiosa
12:40 – 13:00 General discussion
13:00 – 15:00 Break and poster vision
15:00 – 19:00 Online SIGA General Assembly
WEDNESDAY, SEPTEMBER 15th
09:00 – 10:30 Session 2 – Filling the gap between potential and actual yields: Novel routes to boost crop yield
Chairpersons: Tondelli A., Rossini L.
09:00 – 09:30 Invited Lecture
Tardieu F.
Improving yield for suboptimal conditions: making use of alleles for adaptive traits
09:30 – 09:45 Rotasperti L., Tadini L., Chiara M., Crosatti C., Guerra D., Tagliani A., Forlani S., Ezquer I., Horner D. S., Rossini L., Tondelli A., Pesaresi P.
The barley mutant happy under the sun 1 (hus1): a further step towards a new generation of pale green crops
09:45 – 10:00 Miculan M., Nelissen H., Ben Hassen M., Marroni F., Inzè D., Pè M.E., Dell’Acqua M.
A forward genetics approach integrating GWAS and eQTL mapping to dissect leaf development in maize (<i>Zea mays</i>)
10:00 – 10:15 Crosatti C., Michelotti V., Tafuri A., Gazzetti K., Rossi R., Migliorini C., Guerra D., Cattivelli L., Mica E., Battaglia R.
Identification and functional characterization of key genes influencing yield potential in barley
10:15 – 10:30 General discussion
10:30 – 11:00 Break and poster vision
11:00 – 12:25 Session 4 – NGS: Next Generation SIGA
Organized by SIGA Young Researchers
Chairpersons: D’Amelia V., Delvento C.
11:00 – 11:10 Opening
Chairperson: Villano C.
11:10 – 11:40 Invited Lecture
Zhang Y.
Tomato as a model plant for studying metabolic regulation
11:40 – 11:55 Caproni L., Iohannes S.D., Woldeyohannes A.B., Miculan M., Abate Desta E., Fadda C., Pè M.E., Dell’Acqua M.
A data-driven approach harnessing genomic, phenotypic, and bioclimatic diversity reveals climate-driven genomic offset in a collection of Ethiopian teff
11:55 – 12:10 Bordignon S., Farinati S., Milani A., Panozzo S., Scarabel L., Varotto S.
New insights into an exogenous RNAi-based approach for endogenous genes silencing in plants
12:10 – 12:25 Salonia F., Ciacciulli A., Pappalardo H.D., La Malfa S., Licciardello C.
Genome editing applied to induce lycopene accumulation in anthocyanin-rich sweet orange varieties
12:25 – 14:00 Break and poster vision
14:00 – 15:00 Session 4 – (cont)
Chairpersons: Castorina G., Forgione I.
14:00 – 14:30 Invited Lecture
Coupel-Ledru A.
Improving water-use efficiency through the temporal and spatial uncoupling between water loss and carbon gain: insights from a combination of high-throughput phenotyping, quantitative genetics and physiology
14:30 – 14:45 Foresti C., D’Incà E., Vitulo N., Galli M., Zenoni S.
Reconstructing the VviNAC factors intra family regulation network orchestrating the grapevine berry ripening
14:45 – 15:00 Puglisi D., Delbono S., Visioni A., Ozkan H., Kara Ä., Casas A. M., Igartua E., Valè G., Lo Piero A.R., Cattivelli L., Tondelli A., Fricano A.
Genome-enabled prediction models for grain yield, transpiration rate and below-ground traits using a barley MAGIC population
15:00 – 15:20 Break and poster vision
15:20 – 16:50 Session 3 – The bright and dark side of seeds: nutritional, antinutritional and functional properties
Chairpersons: Janni M., Pedrazzini E.
15:20 – 15:50 Invited Lecture
Krishnan H.
A multifaceted approach to improve the nutritional quality of soybean protein
15:50 – 16:05 Sparvoli F., Cominelli E., Liberatore C., Paolo D., Campion B., Nielsen E., Bollini R.
Modulation of bioactive compounds in common bean seed: two sides of the same coin
16:05 – 16:20 Masci S., Sestili F., Camerlengo F., Neerukonda M., Fayer F., Mansueto P., Carroccio A., Schuppan D.
Wheat kernel alpha-amylase/trypsin inhibitor (ATI) gene silencing procedures cause pleiotropic effects and affect ATI pro-inflammatory activity
16:20 – 16:35 Farinon B., Costantini L., Molinari R., Di Matteo G., Ferri S., Garzoli S., Mannina L., Mazzucato A., Merendino N.
Effect of malting on nutritional, antioxidant, and antinutritional properties of the seeds of two industrial hemp (Cannabis sativa L.) cultivars
16:35 – 16:50 General discussion
16:50 – 17:20 Break and poster vision
17:20 – 18:20 SIGA Young Scientist Award 2021
Chairpersons: Pè M.E., Rosellini D.Castorina G.
Drought-responsive ZmFDL1/MYB94 regulates cuticle biosynthesis and cuticle-dependent leaf permeabilityPompili V.
Reducedfire blight susceptibility in apple cultivars using a high-efficiency CRISPR/Cas9-FLP/FRT-based gene editing system

Zampieri R.
Prevention and treatment of autoimmune diseases with plant virus nanoparticles
THURSDAY, SEPTEMBER 16th
09:00 – 10:30 Session 5 – Abiotic stresses and resource use efficiency in a changing climate
Chairpersons: Lo Piero A.R., Salvi S.
09:00 – 09:30 Invited Lecture
Tester M.
Genomics-driven genetics to support development of saltwater agricultural systems
09:30 – 09:45 Baldoni E., Frugis G., Martinelli F., Benny J., Paffetti D., Buti M.
Identification of common key genes and regulatory pathways involved in drought tolerance in four Gramineae species through a comparative transcriptomic meta-analysis
09:45 – 10:00 Giannino D., Testone G., Sobolev A.P., Mele G., Gonnella M., Giuseppe A., Biancari T.
Integrated “omics” of leaf endives stressed by downpour-induced waterlog reveal insights in nutrient variation and molecular aspects of kestose and inulin pathway
10:00 – 10:15 Colzi I., Vergata C., Gonnelli C., Cicatelli A., Guarino F., Castiglione S., Aprile A., De Bellis L., Martinelli F.
Gaining insight into the molecular and phenotypic effects of transgenerational memory due to chromium stress in plants
10:15 – 10:30 Francesca S., Vitale L., Arena C., Olivieri F., Maggio A., Barone A., Rigano M.M.
Physiological and genomic characterization of a tomato genotype able to improve resource use efficiency in water-limited conditions
10:30 – 10:45 Break and poster vision
10:45 – 11:45 Session 5 – (cont)
10:45 – 11:00 Ferrari G., Prazzoli L., Beretta M.
Expoliting salt stress tolerance in Solanum pennelli introgression lines
11:00 – 11:15 Aci M.M., Mauceri A., Abenavoli M.R., Sunseri F., Lupini A.
Short-term transcriptome response to low nitrate revealed N-related differentially expressed genes in two NUE-contrasting tomato genotypes
11:15 – 11:30 Fasano C., Donald N., Carr C., Herzyk P., Amtmann A., Perrella G.
Unravelling the function of the histone deacetylation machinery during stress transcriptional responses in Arabidopsis thaliana
11:30 – 11:45 General discussion
11:45 – 12:00 Break and poster vision
12:00 – 14:30 Interactive Poster Sessions
14:30 – 16:30 Sessione 6 – Plants as biofactories
Chairpersons: Avesani L., Filippone E.
14:30 – 15:00 Invited Lecture
Orzaez D.
Breeding new tobacco plant biofactories through genome editing and synthetic biology
15:00 – 15:15 Maricchiolo E., De Marchis F., Bellucci M., Paolocci F., Cignotti A., Fraternale D., Pallotta M. T., Ballottari M., Perozeni F., Panfili E., Pompa A.
Production of bioactive molecules for human health in plant cells: three case studies
15:15 – 15:30 Santoni M., Gecchele E., Zampieri R., Gandini D., Thueneman E., Lomonossoff G., Avesani L.
Plant virus nanoparticles for molecular diagnostics applications
15:30 – 15:45 Ambrosone A., De Palma M., Leone A., Del Gaudio P., Ruocco M., Turiák L., Bokka R., Fiume I., Tucci M., Pocsfalvi G.
Plant roots release small extracellular vesicles carrying a molecular toolkit for defence against pathogens
15:45 – 16:00 Sevi F., Fiore A., Frusciante S., Romano E., Rambla J. L., Orzaez D., Granell A., Diretto G.
Metabolic engineering of curcuminoids in N. benthamiana leaves
16:00 – 16:15 Lico C., Tanno B., Marchetti L., Novelli F., Giardullo P., Arcangeli C., Pazzaglia S., Podda M., Santi L., Bernini R., Baschieri S., Mancuso M.
Tomato Bushy Stunt Virus nanoparticles as a platform for drug delivery to Shh-dependent medulloblastoma
16:15 – 16:30 General discussion
16:30 – 16:45 Break
16:45 – 18:45 Session 7 – Plant Genetics and Breeding
Chairpersons: Zenoni S., Volpi C.
16:45 – 17:15 Keynote Lecture “New tools for doubled-haploid production in dicots”
Boutilier K.
17:15 – 17:30 Carbone F., Scalabrin S., Bagnaresi P., Tacconi G., Salimonti A., Zelasco S., Forgione I., Sirangelo T. M., Desiderio F., Cattivelli L., Morgante M.
A new reference genome sequence for cultivated olive tree
17:30 – 17:45 Ventimiglia M., Marturano G., Vangelisti A., Usai G., Simoni S., Cavallini A., Giordani T., Natali L., Zuccolo A., Mascagni F.
Survey of transposable elements exaptation events in sunflower (Helianthus annuus L.) genome
17:45 – 18:00 Acquadro A., Zayas A., Martina M., Polli M.F., Di Nardo G., Comino C., Gilardi G., Martin E., Portis E.
BSA-seq analysis reveals genomic regions carrying candidate genes for male sterility phenotype in globe artichoke
18:00 – 18:15 Mazzucato A., Picarella M.E., Granell A.
A point mutation in the HD-Zip III transcription factor SlCORONA/SlHB15 underlies the phenotype of the parthenocarpic fruit (pat) tomato mutant
18:15 – 18:30 Giacomelli L., Scintilla S., Salvagnin U., Zeilmaker T., Dalla Costa L., Malnoy M., Rouppe Van Der Voort J., Moser C.
Generation of mildew-resistant grapevine clones via genome editing: potentials and hurdles
18:30 – 18:45 Dell’Acqua M., Alem C.G., Nigir B., de Sousa K., Poland J., Kidane Y., Abate E., van Etten J., Fadda C., Pè M.E.
Genomics-driven breeding for local adaptation is enhanced by farmers’ traditional knowledge
18:45 Poster Awards
19:00 Closing of Congress

Keywords index

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z ° 1
A
abiotic stress1.35, 4.15, 5.06, 5.08, 5.10, 5.21, 7.27
Aegilops tauschii7.42
affordable phenotyping4.25
Aglianico1.29
agricultural waste management6.08
agro-food processing1.11
agro-morphological traits1.30
agrobiodiversity1.19, 1.20, 7.15
agronomic improvement4.24
agronomic traits7.42
alien introgression5.16
allele-specific transcriptome analysis1.03
alpha-amylase and trypsin inhibitor3.03
alpha-amylase inhibitor3.02
ALS4.04
Amaranthus hybridus4.04
AMF colonization2.05
ancestral relationship7.36
Anemone7.11
anthesis4.23
anthocyanin4.08, 7.41
anti-malarial activity6.09
anti-nutritional factors3.01
antinutritional compounds3.06, 3.09
antinutritional factors3.08
antioxidant capacity3.04
antioxidant compounds4.05
antioxidants1.11, 6.02
apple4.22
apple-pear hybrid7.28
Arabidopsis5.19
Artemisia annua6.09
artemisinin6.09
ascorbic acid7.12, 7.24
autochthonous cultivars7.33
autoimmune diseases6.03
autopolyploidy7.25
B
barley1.39, 2.02, 4.27, 7.08, 7.44
berry ripening4.06
bioactive compounds3.09
bioagents4.29
bioassays4.29
bioavalaibility6.11
bioclimatic diversity4.03
biodiversity3.06
bioinformatic tools7.03
bioinformatics4.09
biomass accumulation2.02
biopharmaceuticals6.02
biorefinery6.10, 6.12
biotic stress1.35, 4.08
biotransformation7.09
black lemma and pericarp1.39
blast disease1.12
blast resistance1.12
Botrytis cinerea1.27
breeding5.16, 7.07, 7.11, 7.21
broccoli sprouts6.11
bromatological analyses4.12
broomrapes7.48
BSA-seq7.04
bud dormancy4.11
C
Camelina sativa4.12
candidate genes2.06, 4.15, 7.38
Candidatus liberibacter1.21
cannabis4.16
CAPS7.13
carbohydrate pathways3.05
cardoon callus cultures6.12
carotenoids1.10, 7.40
cell cultures6.10
chicory7.36
chilling requirement4.11
chip1.36
chitin receptor1.29
chlorophyll content2.02
chloroplast-to-nucleus communication7.37
chromatin modifications4.11
chromium5.04
chromosome engineering5.15, 5.16
cisgenesis7.19
cistrome4.28
Citrus4.05
climate change1.11, 1.37, 2.01, 5.09
climate-driven vulnerability4.03
climatic change1.34, 5.10
co-expression analysis1.38
cold stress5.11
combined DNA fingerprint7.36
combined stress5.05
common bean1.30
comparative genomics1.27, 5.11
comparative transcriptomics5.02
complex traits1.25
conservation variety1.23
conservative agriculture1.33
copper6.07
correlation analysis7.35
CRISPR-Cas9 gene silencing3.03
CRISPR-Cas9-based enrichment1.13
CRISPR/Cas94.05, 4.20, 4.26, 7.18, 7.20, 7.32, 7.43, 7.48
crop protection4.29
crop yield7.30
Cucumis melo L.1.31
Cucurbita maxima1.10
Cucurbita pepo7.09
culm4.27
cultivar-specific genome1.13
cultivated cardoon5.11
cultivation history4.09
Curcuminoids6.05
cuticle7.49
cv Microtom5.14
D
DAP-seq4.06, 4.28, 4.30, 4.31
de-novo assembly1.13, 7.02
defense responses5.13
denaturing gradient gel electrophoresis1.31
development7.30
diary cow manure6.08
diatoms6.07
Dioecious4.16
Diplotaxis7.27
DMR67.43
DNA markers1.07
DNA methylation4.08, 4.11, 4.22
DNA-Seq1.03
domestication1.03, 1.05
domestication genes1.06
dormancy4.19
downy and powdery mildew7.06
downy mildew7.18
drought5.05, 5.18, 5.20
drought stress4.13, 5.06, 5.22
drought tolerance5.02, 5.16
drug delivery6.11
dsRNAs4.04
durum wheat1.08, 1.23, 2.08, 3.10, 4.25, 5.10, 5.22, 7.19, 7.22, 7.26, 7.34, 7.45
E
ear prolificacy7.16
eggplant7.41
Emilia Romagna1.18, 1.19
EMS mutagenesis1.32
endemic plant1.28
endive leaves5.03
endoplasmic reticulum3.07
environmental sensor7.37
environmental stresses5.18
epigenetic regulation7.41
epigenetics4.21, 4.22, 5.04, 5.08, 7.21
ex situ conservation1.18
exaptation7.03
expression atlas4.23
expression Quantitative Trait Loci (eQTL) mapping2.03
external factors1.38
extracellular vesicles6.04
F
False flax3.08
FAs4.10
fasciation7.14
fatty acids6.12, 7.47
fertility2.07
Ficus carica L.1.17
fine mapping7.38
flavor7.21
flowering4.19
food security1.09, 1.11, 1.14
food traceability7.13
forest trees4.15
free asparagine1.08
fruit development7.05
fruit developmental stages7.33
fruit quality4.18, 7.24
fruit ripening4.31
fruits4.05
functional biodiversity1.34
functional foods3.10
fungal disease7.19
Funneliformis mosseae2.05
Fusarium7.27
Fusarium culmorum7.39
G
GBS1.16, 4.09, 4.12
GCN4.28
gene characterisation4.21
gene co-expression network5.02
gene co-expression network analysis5.07
gene duplication1.27
gene editing3.08, 7.17
gene espressione regulation5.12
gene expression4.08, 7.33
gene expression analysis4.29
gene knock-out7.12
gene regulation4.31
gene silencing4.04
Genebank1.02
genetic characterisation1.18, 1.19, 1.20
genetic diversity1.01, 1.07, 1.16, 1.23, 1.26, 1.33, 7.42
genetic progress2.01
genetic resources1.30, 7.40
genetic structure4.18
genetic variability1.17
genetics1.22
genome annotation1.17
genome assembly1.17
genome editing1.06, 1.35, 5.09, 7.06, 7.18, 7.24
genome evolution7.03
genome re-sequencing7.41
Genome Wide Association Mapping1.04
Genome Wide Association Studies (GWAS)2.03
Genome Wide Association Study4.03
genomic prediction2.01, 4.07, 7.29
genomic selection7.07, 7.26
genomics1.09, 7.04, 7.07
genotype x environment1.30
genotyping4.16
germplasm1.34
germplasm collection1.26
Global Durum Panel1.08
globe artichoke7.04
glutathione transferase5.18
GoldenBraid4.26
GoldenBraid 3.04.05
grafted plant2.05
grafting4.22
grain2.07
grain number5.16
grain number increase2.08
Grain Protein Content7.22
grain size2.06
grain yield2.02, 2.06, 7.26
Gramineae5.02
grapevine1.36, 1.37, 4.06, 4.28, 4.30, 4.31, 7.46
grapevine flower4.23
Greening1.21
GRF2.04
growth4.02
growth promotion7.39
GRXs1.27
GS/GOGAT cycle7.22
GTR transporters3.08
GWAS1.02, 1.08, 1.09, 1.12, 1.16, 1.24, 1.37, 4.18, 7.29, 7.38, 7.47
H
hairy roots7.17
HD-Zip transcription factors7.05
heat shock5.15
heat stress4.25, 5.05, 5.14
Helianthus annuus7.03
Hi-C7.02
high-density consensus map1.36
high-throughput phenotyping4.02
Hordeum vulgare5.21, 7.08
HRM7.28
I
ICP-MS6.07
iku14.26
Illumina1.21
in situ and ex situ conservation1.20
in situ conservation1.19
industrial hempseeds3.04
inflorescence5.21
Inflorescence Architecture7.30
inhibition growth6.07
invertase7.17
iron starvation5.04
ITS1.31
J
juvenile and adult leaves7.49
K
KASP7.38
kernel texture3.10
kernerl row number7.14
Kunitz-trypsin inhibitor3.01
L
L-proline transporter5.14
laccase2.04
landraces1.15, 1.30, 7.45
landscape genomics1.14, 4.03
lectins3.02
legumes1.06, 1.33, 3.02
lignin6.10
Lipid Transfer Proteins7.23
lipoxygenase7.20
local biodiversity safeguard7.31
local maize1.19
local varieties5.17
lodging resistance4.27
low phytic acid mutants4.13
LysM1.29
M
MAGIC1.22, 4.07
maize1.15, 1.26, 1.34, 4.13, 7.14, 7.16, 7.49
maize germplasm1.18
male sterility7.04
malt3.04
mandarins4.26
Marker Assisted Selection1.04, 7.46
Marker-Trait Associations1.12
MAS4.12
MCSeEd4.22
Medicago sativa7.25
Medulloblastoma Targeting peptides6.06
meiosis4.21
melatonin5.17
meta-analysis1.35, 4.15
metabolic characterisation1.20
metabolic characterization7.40
metabolic engineering6.05, 6.09, 6.12
metabolic pathway7.35
metabolites3.09
metabolomics5.22
metagenomics1.33
metal hyperaccumulation7.10
microarray4.14, 7.35
microRNAs5.15
microsatellites4.16, 7.11, 7.31
miRNA6.11, 7.10
modelling2.01
molecular diagnostics6.03
molecular fingerprinting7.33
Monoecious4.16
morphological traits1.23
mountain environment1.15
Mozambique1.14
multi-locus GWAS1.25
multigenic family7.23
multiparental populations2.03
mutagenesis7.08, 7.32
mutant population1.32
mutants3.08, 4.21
MYB6.10
N
N-forms5.19
NAC TFs4.06
nanoferitlization7.09
Nanopore sequencing1.13
nanovescicles6.11
Near Isogenic lines7.22
necrotics7.08
neglected and underutilized crop species4.03
New breeding techniques4.24
new plant breeding techniques7.12
Next generation sequencing NGS7.08
NGS-technologies4.30
nitrate5.07
nitrogen4.19
nitrogen recovery6.08
Nitrogen Use Efficiency5.07, 5.19, 7.22
Non Celiac Wheat Sensitivity3.03
NUC1.09
nutrient stress5.20
nutrition1.11, 7.10
nutritional compounds3.06
O
Ocimum basilicum cv. FT Italiko7.18
oilseed7.23
Olea europaea7.33
olive1.07, 7.02
olive fruit4.10
olive oil7.47
ornamentals7.11
Oryza sativa1.01, 5.21
osmotic adjustment5.22
ovule development7.05
Oxford Nanopore1.21
P
P sustainability4.13
pan-genome1.05
parthenocarpy7.05
participatory variety selection1.14
pathogen resistance7.20
pathology7.43
pea4.09
peach4.19
pedigree method1.10
pepper1.02, 5.17
Phaseolus vulgaris1.06, 1.32
Phelipanche ramosa7.48
phenilpropanoids4.10
phenology7.46
phenols7.47
phenomics2.01
phenotypic descriptors7.31
phenotyping1.22, 1.32, 4.21, 7.47
phenylpropanoids4.17
photoperception4.10
photosynthesis2.02
photosynthetic mutants7.44
phycoremediation6.07, 6.08
phytic acid3.02
phytohormones5.21
plant6.05
plant as biofactories6.06
plant bioreactor6.02
plant breeding1.10, 4.12
plant conservation1.28
plant development4.17, 5.08
plant growth5.13
Plant Molecular Farming6.03
plant regeneration7.06
plant resistance7.46
plant stem cells6.02
Plant Virus Nanoparticles6.03, 6.06
plant virus nanoparticles drug loading6.06
plant-pathogen interactions6.04
plant-soil interaction5.12
plasticity5.12
plastid development7.37
plastids7.37
PMR44.20
pointed maize1.15
pollen7.09
polyphenol content7.33
Pomella genovese1.20
poplar7.29
population genetic structure1.28
population genomics1.02
PPR7.44
Pre Breeding1.04
primary metabolites7.40
priming5.17
proso millet1.09
protein body biogenesis3.07
protein complex5.08
Prunus4.24
Prunus dulcis7.31
PTR-ToF-MS4.18
purple color1.38
Q
QTL7.14, 7.16, 7.34
QTL cluster2.06
QTL mapping2.08
QTL/GWAS4.02
QTLome1.04
quality7.21
quantitative trait loci4.27
quantitative trait locus1.24
Quantitative Trait Nucleotides1.25
quinoa5.01
R
R4.14
rain excess waterlog5.03
RAPD1.28
rDNA1.31
real time PCR5.10
Red Sea Farms5.01
reference genome1.01, 7.02
regulatory network4.06
relative water content5.22
reproductive level5.14
resistance1.07, 4.20, 7.06
resistance genes1.21
resistance inducers4.29
resistance QTL7.29
rice1.12
RNA-seq2.05, 4.11, 4.14, 4.19, 5.03, 5.07, 7.09, 7.25, 7.34, 7.38, 7.41
RNA-sequencing1.35
RNAi4.04
RNAi gene silencing3.03
rocket7.27
root architecture1.24
root exudate6.04
root growth angle (RGA)7.34
root system architecture4.13
root system traits7.42
routes of diversification1.02
RRS5.05
rye7.15
S
salinity tolerance5.01
salt5.18
salt stress5.06, 5.11, 5.13, 7.27
secondary metabolite5.12, 7.28
seed3.02, 3.06, 3.09, 5.17
seed coating7.39
seed development3.07
seed size2.04
seedless4.26
selective sweeps1.05, 4.09
seminal root angle4.07
seminal root number4.07
Seminal root trait1.24
Septoria Tritici Blotch7.45
sequencing1.01
Shiny4.14
side effects3.05
SlDET1 gene7.32
smallholder farming7.07
smallholder farming systems1.14
SNP1.16, 1.36, 7.13, 7.25
SNP-chip7.28
SNPs1.29, 1.31
soil drench5.13
soil-borne cereal mosaic virus1.08
Solanaceae7.37
Solanum lycopersicum5.18, 7.24
Solanum melongena1.05
Solanum pennelli5.06
Solanum pennelli introgression lines7.48
Solanum tuberosum4.17
source-sink relation2.04
soybean3.01
spike2.07
spike fertility2.08
SSR7.28
starch mutants3.05, 3.10
STB7.45
stomata5.09
storage proteins3.07, 3.09
straw composition1.25
stress memory5.04
stress physiology5.15
strigolactones7.48
structural variation1.39
sugar and inulin pathway5.03
sulfur assimilatory pathway3.01
sunflower7.23
susceptibility7.43
susceptibility genes4.20
sustainability3.10, 7.18
sustainable agriculture1.34
sustainable production6.12
SWEET2.04
sweet cherry1.16
sweet orange4.08
systemin5.13
T
targeted RNA4.10
targeted-resequencing4.25
tau analysis4.23
terraced environment7.15
Tillering7.16
TILLING1.32
TILLING-by-sequencing1.06
tissues1.38
tocopherols3.04
tomato1.22, 1.27, 2.05, 4.01, 4.20, 5.06, 5.07, 5.20, 7.05, 7.17, 7.21, 7.43
Tomato Bushy Stunt Virus6.06
tomato fruit7.32
tomato landraces7.40
tomato nutritional quality7.12
tomatoes5.01
TOMRES5.20
transcript7.35
transcription factor5.11
transcription factors1.38, 4.30, 5.02, 7.30
transcription regulation4.28
transcriptome3.05
transcriptomics4.14, 5.08, 7.25
transformed plants5.14
transgenerational5.04
transient expression6.09
transpiration4.02
transpiration rate4.07
transposable elements7.03
Trichoderma sp.7.39
trichome4.17
Triticum turgidum1.04
trypsin inhibitors3.04
U
untargeted metabolic profiling5.03
unwanted variation7.35
V
varaison1.37
variability1.22
virus-like particles6.03
Vitis 18KSNPChip1.37
Vitis vinifera1.03, 5.09, 7.06, 7.20
Vitis18K1.36
VOCs4.18
VvNAC034.31
W
water-use efficiency4.02
Weighted Gene Co-expression Network Analysis (WGCNA)2.03
WGCNA4.23, 5.19
wheat1.25, 1.33, 2.06, 2.07, 3.03, 3.05, 7.07, 7.15, 7.39
whole genome resequencing1.05, 7.42
wild germplasm5.15
wild grapevines1.29
wild species7.24
Woolly Poplar Aphid7.29
WRKY5.10
WRKY34.30
X
XP7.01
Xylella fastidiosa1.07
Y
yellow tomato7.13
yield5.16
yield increment2.08
Z
Zea mays2.03, 7.20
zeins3.07
ZmFDL17.49
ZmGL157.49
Zn homeostasis7.10
Zymoseptoria tritici7.45
°
°Brix7.17
1
1954 sampling1.18